Gene: Solyc02g087860.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g087860.3
  • Transcript Identifier Solyc02g087860.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 48159429-48160866 : negative

Gene Family Information

  • ID HOM05D000982
  • #Genes/#Species 613/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g087860.3.1
  • uniprot B6CG44
  • gene_id Solyc02g087860

Descriptions

  • Description Transcription factor PRE5 (AHRD V3.3 *** A0A1U8FQB1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0040008
IEA
GOA Databaseregulation of growth
GO:0040008
IEA
InterProregulation of growth
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT5G39860
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT5G39860
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G39860
GO:0080113
ISO
PLAZA Integrative Orthologyregulation of seed growth Os02g0747900
GO:0009741
ISO
PLAZA Integrative Orthologyresponse to brassinosteroid AT5G39860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G28857

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os06g0226500
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G15160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044293 Transcription factor PRE
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)