Gene: Solyc02g087180.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g087180.4
  • Transcript Identifier Solyc02g087180.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 47669479-47671872 : positive

Gene Family Information

  • ID HOM05D004552
  • #Genes/#Species 158/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g087180.4.1
  • uniprot A0A3Q7F9V5
  • gene_id Solyc02g087180

Descriptions

  • Description Mediator of RNA polymerase II transcription subunit 4 (AHRD V3.3 *** A0A2G2XIE7_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003712
IBA
IEA
GOA Databasetranscription coregulator activity
GO:0003712
IEA
InterProtranscription coregulator activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G02850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016592
IEA
GOA Databasemediator complex
GO:0016592
IEA
InterPromediator complex
GO:0005634
IEA
GOA Databasenucleus
GO:0070847
IBA
GOA Databasecore mediator complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019258 Mediator complex, subunit Med4
Mapman id Description
15.3.4.4.2.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.middle module.component MED4