Gene: Solyc02g085950.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g085950.4
  • Transcript Identifier Solyc02g085950.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 46727868-46728620 : positive

Gene Family Information

  • ID HOM05D001330
  • #Genes/#Species 472/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g085950.4.1
  • uniprot P05349
  • gene_id Solyc02g085950

Descriptions

  • Description cell wall protein X77373
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G67090
GO:0110102
ISO
PLAZA Integrative Orthologyribulose bisphosphate carboxylase complex assembly AT5G38410
GO:0019253
IEA
GOA Databasereductive pentose-phosphate cycle
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0015977
IEA
GOA Databasecarbon fixation
GO:0009853
IEA
GOA Databasephotorespiration
GO:0051607
IEA
GOA Databasedefense response to virus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G38430
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G38410
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT5G38430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT1G67090
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G38430
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G38430
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G38430
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT5G38420
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT1G67090
GO:0009507
IEA
GOA Databasechloroplast
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G38430
GO:0030054
IEA
GOA Databasecell junction
GO:0009536
IEA
GOA Databaseplastid
GO:0009506
IEA
GOA Databaseplasmodesma

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024680 Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal
IPR024681 Ribulose bisphosphate carboxylase, small subunit
IPR000894 Ribulose bisphosphate carboxylase small subunit, domain
IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily
Mapman id Description
1.2.1.1.2 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo heterodimer.small subunit