Gene: Solyc02g085240.4

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc02g085240.4
Transcript Identifier Solyc02g085240.4.1
Gene Type Coding gene
Location SL4.0ch02 : 46221000-46223134 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000849
#Genes/#Species 704/100
Phylogenetic origin

ID ORTHO05D006066
#Genes/#Species 148/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc02g085240.4.1
uniprot A0A3Q7F9M5
gene_id Solyc02g085240

Descriptions

Short descriptions
Ortholog descriptions

Description AP complex subunit sigma (AHRD V3.3 *** A0A2G2XGH6_CAPBA)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0015031	IEA	GOA Database	protein transport
GO:0015031	IEA	InterPro	protein transport
GO:0006896	IEA	GOA Database	Golgi to vacuole transport
GO:0006896	IEA	InterPro	Golgi to vacuole transport
GO:0006886	IEA	GOA Database	intracellular protein transport
GO:0016192	IBA IEA	GOA Database	vesicle-mediated transport

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030123	IEA	GOA Database	AP-3 adaptor complex
GO:0030123	IEA	InterPro	AP-3 adaptor complex
GO:0016020	IEA	GOA Database	membrane
GO:0030117	IEA	GOA Database	membrane coat
GO:0043231	IBA	GOA Database	intracellular membrane-bounded organelle

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR016635	Adaptor protein complex, sigma subunit
IPR011012	Longin-like domain superfamily
IPR027155	AP-3 complex subunit sigma
IPR022775	AP complex, mu/sigma subunit

Mapman id	Description
22.3.1.4.4	Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-3 cargo adaptor complex.small subunit sigma (AP3S)