Gene: Solyc02g083940.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g083940.3
  • Transcript Identifier Solyc02g083940.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 45179641-45185304 : positive

Gene Family Information

  • ID HOM05D002668
  • #Genes/#Species 257/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g083940.3.1
  • uniprot A0A3Q7F6W9
  • gene_id Solyc02g083940

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1KR53_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080182
IBA
GOA Databasehistone H3-K4 trimethylation
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT5G66240

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003682
IBA
GOA Databasechromatin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048188
IBA
GOA DatabaseSet1C/COMPASS complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G66240
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G66240

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020472 G-protein beta WD-40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
12.3.3.1.4 Chromatin organisation.post-translational histone modification.histone lysine methylation.COMPASS histone trimethylation complex.auxiliary component S2Lb