Gene: AT5G66240

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G66240
  • Transcript Identifier AT5G66240.1
  • Gene Type Coding gene
  • Location Chr5 : 26466268-26468201 : positive

Gene Family Information

  • ID HOM05D002668
  • #Genes/#Species 257/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G66240.1
  • uniprot Q8RXD8

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein
  • Computational description Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1); Has 21938 Blast hits to 12469 proteins in 522 species: Archae - 46; Bacteria - 4852; Metazoa - 7701; Fungi - 4572; Plants - 2085; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009827
IMP
Gene Ontologyplant-type cell wall modification1
GO:0080182
IBA
Gene Ontologyhistone H3-K4 trimethylation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding
GO:0003682
IBA
Gene Ontologychromatin binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IDA
ISM
Gene Ontologycytoplasm1
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex3
GO:0005634
IDA
Gene Ontologynucleus1
GO:0048188
IBA
Gene OntologySet1C/COMPASS complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
12.3.3.1.4 Chromatin organisation.post-translational histone modification.histone lysine methylation.COMPASS histone trimethylation complex.auxiliary component S2Lb