Gene: Solyc02g080420.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g080420.4
- Transcript Identifier Solyc02g080420.4.1
- Gene Type Coding gene
- Location SL4.0ch02 : 42627277-42632975 : positive
Gene Family Information
- ID HOM05D000561
- #Genes/#Species 984/100
- Phylogenetic origin
- ID ORTHO05D000514
- #Genes/#Species 826/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc02g080420.4.1
- uniprot A0A3Q7F507
- gene_id Solyc02g080420
Descriptions
- Description RNA-binding protein (AHRD V3.3 *** A0A2K3PBB6_TRIPR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010193 | ISO | PLAZA Integrative Orthology | response to ozone | AT1G11650 |
| GO:0051028 | ISO | PLAZA Integrative Orthology | mRNA transport | Os04g0625800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003729 | IBA | GOA Database | mRNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os04g0625800 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IBA | GOA Database | cytosol | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | Os04g0625800 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | Os04g0625800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.8.4 | RNA processing.mRNA sequestration.mRNA-binding regulatory factor (RBP45/47) |