Gene: Solyc02g080320.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g080320.4
  • Transcript Identifier Solyc02g080320.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 42551890-42555134 : negative

Gene Family Information

  • ID HOM05D005787
  • #Genes/#Species 135/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g080320.4.1
  • uniprot A0A3Q7F4Y9
  • gene_id Solyc02g080320

Descriptions

  • Description RNA pseudouridine synthase 6, chloroplastic (AHRD V3.3 *** A0A2G2VBE2_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
GOA Databasepseudouridine synthesis
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
GOA DatabaseRNA modification
GO:0009451
IEA
InterProRNA modification
GO:0000455
IBA
GOA Databaseenzyme-directed rRNA pseudouridine synthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0009982
IBA
IEA
GOA Databasepseudouridine synthase activity
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006145 Pseudouridine synthase, RsuA/RluA-like
IPR020103 Pseudouridine synthase, catalytic domain superfamily
Mapman id Description
35.1 not assigned.annotated