Gene: Solyc02g079840.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g079840.2
- Transcript Identifier Solyc02g079840.2.1
- Gene Type Coding gene
- Location SL4.0ch02 : 42236229-42238798 : positive
Gene Family Information
- ID HOM05D000067
- #Genes/#Species 3957/93
- Phylogenetic origin
- ID ORTHO05D000280
- #Genes/#Species 1201/90
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc02g079840.2.1
- uniprot G5CV40
- gene_id Solyc02g079840
Descriptions
- Description Terpene synthase (AHRD V3.3 *** G5CV40_SOLLC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT4G16740 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT3G25830 |
| GO:0016099 | ISO | PLAZA Integrative Orthology | monoterpenoid biosynthetic process | AT3G25830 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT3G25830 |
| GO:0009625 | ISO | PLAZA Integrative Orthology | response to insect | AT4G16740 |
| GO:0080027 | ISO | PLAZA Integrative Orthology | response to herbivore | AT4G16740 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT4G16740 |
| GO:0016106 | ISO | PLAZA Integrative Orthology | sesquiterpenoid biosynthetic process | AT4G16740 |
| GO:0016102 | IEA | GOA Database | diterpenoid biosynthetic process | |
| GO:0016102 | IEA | InterPro | diterpenoid biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034768 | ISO | PLAZA Integrative Orthology | (E)-beta-ocimene synthase activity | AT4G16740 |
| GO:0050551 | ISO | PLAZA Integrative Orthology | myrcene synthase activity | AT4G16740 |
| GO:0052578 | ISO | PLAZA Integrative Orthology | alpha-farnesene synthase activity | AT4G16740 |
| GO:0010333 | IEA | GOA Database | terpene synthase activity | |
| GO:0010333 | IEA | InterPro | terpene synthase activity | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0016829 | IEA | InterPro | lyase activity | |
| GO:0000287 | IEA | GOA Database | magnesium ion binding | |
| GO:0000287 | IEA | InterPro | magnesium ion binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G16740 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G25830 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001906 | Terpene synthase, N-terminal domain |
| IPR034741 | Terpene cyclase-like 1, C-terminal domain |
| IPR008949 | Isoprenoid synthase domain superfamily |
| IPR036965 | Terpene synthase, N-terminal domain superfamily |
| IPR005630 | Terpene synthase, metal-binding domain |
| IPR044814 | Terpene cyclases, class 1, plant |
| IPR008930 | Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid |
| Mapman id | Description |
|---|---|
| 9.1.4.2 | Secondary metabolism.terpenoids.terpene biosynthesis.mono-/sesquiterpene-/diterpene synthase |