Gene: Solyc02g072000.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g072000.3
  • Transcript Identifier Solyc02g072000.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 39339420-39340742 : positive

Gene Family Information

  • ID HOM05D000123
  • #Genes/#Species 2785/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g072000.3.1
  • uniprot A0A3Q7F4M9
  • gene_id Solyc02g072000

Descriptions

  • Description Heat shock transcription factor (AHRD V3.3 *** Q9M597_MEDSA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048527
ISO
PLAZA Integrative Orthologylateral root development AT5G45710
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G45710
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT4G18880
GO:0000302
ISO
PLAZA Integrative Orthologyresponse to reactive oxygen species AT4G18880
GO:0048530
ISO
PLAZA Integrative Orthologyfruit morphogenesis AT5G45710
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT4G18880
GO:0009958
ISO
PLAZA Integrative Orthologypositive gravitropism AT5G45710
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT5G45710
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G45710
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0034605
IBA
GOA Databasecellular response to heat
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G18880
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G18880
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G18880
GO:0003700
IBA
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000232 Heat shock factor (HSF)-type, DNA-binding
IPR027725 Heat shock transcription factor family
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
15.5.13 RNA biosynthesis.transcriptional regulation.transcription factor (HSF)