Gene: Solyc02g069720.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g069720.3
  • Transcript Identifier Solyc02g069720.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 37554280-37558069 : positive

Gene Family Information

  • ID HOM05D002138
  • #Genes/#Species 314/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g069720.3.1
  • uniprot A0A3Q7F227
  • gene_id Solyc02g069720

Descriptions

  • Description LSD1 zinc finger family protein (AHRD V3.3 *** F4JUW0_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043067
ISO
PLAZA Integrative Orthologyregulation of programmed cell death AT4G20380
GO:0009862
ISO
PLAZA Integrative Orthologysystemic acquired resistance, salicylic acid mediated signaling pathway AT4G20380
GO:0002240
ISO
PLAZA Integrative Orthologyresponse to molecule of oomycetes origin AT4G20380
GO:0043069
ISO
PLAZA Integrative Orthologynegative regulation of programmed cell death AT4G20380
GO:0000303
ISO
PLAZA Integrative Orthologyresponse to superoxide AT4G20380
GO:0009626
ISO
PLAZA Integrative Orthologyplant-type hypersensitive response AT4G20380
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT4G20380
GO:0010618
ISO
PLAZA Integrative Orthologyaerenchyma formation AT4G20380
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT4G20380
GO:0008219
ISO
PLAZA Integrative Orthologycell death AT4G20380
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway AT4G20380
GO:0010602
ISO
PLAZA Integrative Orthologyregulation of 1-aminocyclopropane-1-carboxylate metabolic process AT4G20380
GO:0010310
ISO
PLAZA Integrative Orthologyregulation of hydrogen peroxide metabolic process AT4G20380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT4G20380
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G20380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040319 LSD1-like
IPR005735 Zinc finger, LSD1-type
Mapman id Description
27.2.1 Multi-process regulation.Programmed Cell Death (PCD) system.PCD regulatory protein (LSD/LOL)