Gene: Solyc02g014360.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g014360.3
  • Transcript Identifier Solyc02g014360.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 14672226-14674956 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g014360.3.1
  • uniprot A0A3Q7EX99
  • gene_id Solyc02g014360

Descriptions

  • Description Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8FF53_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G14850
GO:0019287
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathway AT4G14850
GO:0050790
ISO
PLAZA Integrative Orthologyregulation of catalytic activity AT4G14850
GO:0019288
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway AT4G14850
GO:0016125
ISO
PLAZA Integrative Orthologysterol metabolic process AT4G14850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding
GO:0034046
ISO
PLAZA Integrative Orthologypoly(G) binding AT4G14850
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G14850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G14850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.9 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF11)