Gene: Solyc01g109200.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g109200.4
  • Transcript Identifier Solyc01g109200.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 88571667-88572707 : negative

Gene Family Information

  • ID HOM05D000086
  • #Genes/#Species 3623/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g109200.4.1
  • uniprot A0A3Q7FDG5
  • gene_id Solyc01g109200

Descriptions

  • Description RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1Q188_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IBA
GOA Databaseubiquitin protein ligase binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G18930
GO:0031982
ISO
PLAZA Integrative Orthologyvesicle AT3G18930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR044675 E3 ubiquitin-protein ligase RING1-like
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase