Gene: Solyc01g105230.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g105230.4
  • Transcript Identifier Solyc01g105230.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 85771692-85782200 : positive

Gene Family Information

  • ID HOM05D000660
  • #Genes/#Species 863/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g105230.4.1
  • uniprot A0A3Q7ER35
  • gene_id Solyc01g105230

Descriptions

  • Description Calmodulin-binding transcription activator 2 (AHRD V3.3 *** A0A2G3AUZ8_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G09410
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G09410
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G09410
GO:0050826
ISO
PLAZA Integrative Orthologyresponse to freezing AT5G09410
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G09410
GO:0071275
ISO
PLAZA Integrative Orthologycellular response to aluminum ion AT5G64220
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G09410
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G64220
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G64220
GO:0005515
IEA
InterProprotein binding
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0003690
IBA
GOA Databasedouble-stranded DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005516
IEA
GOA Databasecalmodulin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036770 Ankyrin repeat-containing domain superfamily
IPR002110 Ankyrin repeat
IPR013783 Immunoglobulin-like fold
IPR014756 Immunoglobulin E-set
IPR002909 IPT domain
IPR000048 IQ motif, EF-hand binding site
IPR005559 CG-1 DNA-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
15.5.26 RNA biosynthesis.transcriptional regulation.transcription factor (CAMTA)