Gene: Solyc01g099400.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g099400.4
- Transcript Identifier Solyc01g099400.4.1
- Gene Type Coding gene
- Location SL4.0ch01 : 81931566-81937013 : positive
Gene Family Information
- ID HOM05D001050
- #Genes/#Species 579/100
- Phylogenetic origin
- ID ORTHO05D001270
- #Genes/#Species 443/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc01g099400.4.1
- uniprot A0A3Q7F812
- gene_id Solyc01g099400
Descriptions
- Description WD-40 repeat containing protein (AHRD V3.3 *** A0A0K0XR34_TOBAC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT3G62770 |
GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT3G62770 |
GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT3G62770 |
GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT3G62770 |
GO:0042594 | ISO | PLAZA Integrative Orthology | response to starvation | AT3G62770 |
GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT3G62770 |
GO:0006914 | ISO | PLAZA Integrative Orthology | autophagy | AT3G62770 |
GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT3G62770 |
GO:0010508 | ISO | PLAZA Integrative Orthology | positive regulation of autophagy | AT3G62770 |
GO:0000422 | IBA | GOA Database | autophagy of mitochondrion | |
GO:0034497 | IBA | GOA Database | protein localization to phagophore assembly site | |
GO:0006497 | IBA | GOA Database | protein lipidation | |
GO:0044804 | IBA | GOA Database | autophagy of nucleus |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0032266 | IBA | GOA Database | phosphatidylinositol-3-phosphate binding | |
GO:0080025 | IBA | GOA Database | phosphatidylinositol-3,5-bisphosphate binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G62770 |
GO:0005829 | IBA | GOA Database | cytosol | |
GO:0034045 | IBA | GOA Database | phagophore assembly site membrane | |
GO:0019898 | IBA | GOA Database | extrinsic component of membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.3.3.5.1.3 | Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-2-18 membrane-recruiting complex.component ATG18 |