Gene: Solyc01g098550.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g098550.3
  • Transcript Identifier Solyc01g098550.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 81297043-81302747 : positive

Gene Family Information

  • ID HOM05D003408
  • #Genes/#Species 201/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g098550.3.1
  • uniprot A0A3Q7EP38
  • gene_id Solyc01g098550

Descriptions

  • Description Tryptophan synthase alpha chain (AHRD V3.3 *** A0A2G2W7K5_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G54640
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism AT3G54640
GO:0052544
ISO
PLAZA Integrative Orthologydefense response by callose deposition in cell wall AT3G54640
GO:0000162
IBA
IEA
GOA Databasetryptophan biosynthetic process
GO:0006568
IEA
GOA Databasetryptophan metabolic process
GO:0006568
IEA
InterProtryptophan metabolic process
GO:0009073
IEA
GOA Databasearomatic amino acid family biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033984
ISO
PLAZA Integrative Orthologyindole-3-glycerol-phosphate lyase activity AT4G02610
GO:0004834
IBA
IEA
GOA Databasetryptophan synthase activity
GO:0004834
IEA
InterProtryptophan synthase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
GOA Databasechloroplast
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G02610
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G54640
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002028 Tryptophan synthase, alpha chain
IPR011060 Ribulose-phosphate binding barrel
IPR013785 Aldolase-type TIM barrel
Mapman id Description
4.1.5.3.5.1 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit alpha