Gene: Solyc01g097640.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g097640.3
  • Transcript Identifier Solyc01g097640.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 80666696-80681438 : positive

Gene Family Information

  • ID HOM05D002230
  • #Genes/#Species 302/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g097640.3.1
  • uniprot A0A3Q7EM99
  • gene_id Solyc01g097640

Descriptions

  • Description Ribosome biogenesis protein BMS1-like protein (AHRD V3.3 *** A0A2G2YYU1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0000462
IBA
GOA Databasematuration of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000479
IBA
GOA Databaseendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IBA
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IBA
GOA DatabaseGTPase activity
GO:0034511
IBA
GOA DatabaseU3 snoRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0005730
IEA
GOA Databasenucleolus
GO:0030686
IBA
GOA Database90S preribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039761 Ribosome biogenesis protein Bms1/Tsr1
IPR012948 AARP2CN
IPR037875 Ribosome biogenesis protein Bms1, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR007034 Ribosome biogenesis protein BMS1/TSR1, C-terminal
Mapman id Description
35.1 not assigned.annotated