Gene: Solyc01g094310.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g094310.1
- Transcript Identifier Solyc01g094310.1.1
- Gene Type Coding gene
- Location SL4.0ch01 : 78090800-78091075 : negative
Gene Family Information
- ID HOM05D002725
- #Genes/#Species 253/98
- Phylogenetic origin
- ID ORTHO05D003279
- #Genes/#Species 233/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc01g094310.1.1
- uniprot A0A3Q7EL22
- gene_id Solyc01g094310
Descriptions
- Description U4/U6 small nuclear ribonucleoprotein Prp31-like (AHRD V3.3 *-* A0A2K3LEE4_TRIPR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000244 | IEA | GOA Database | spliceosomal tri-snRNP complex assembly | |
| GO:0000244 | IEA | InterPro | spliceosomal tri-snRNP complex assembly | |
| GO:0000398 | IBA IEA | GOA Database | mRNA splicing, via spliceosome | |
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046540 | IEA | GOA Database | U4/U6 x U5 tri-snRNP complex | |
| GO:0046540 | IEA | InterPro | U4/U6 x U5 tri-snRNP complex | |
| GO:0097526 | IBA | GOA Database | spliceosomal tri-snRNP complex | |
| GO:0005687 | IBA | GOA Database | U4 snRNP | |
| GO:0071011 | IBA | GOA Database | precatalytic spliceosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |