Gene: Solyc01g088740.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g088740.4
  • Transcript Identifier Solyc01g088740.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 75751569-75755808 : negative

Gene Family Information

  • ID HOM05D001479
  • #Genes/#Species 429/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g088740.4.1
  • uniprot A0A3Q7EK91
  • gene_id Solyc01g088740

Descriptions

  • Description Casein kinase II subunit beta (AHRD V3.3 *** A0A328DKK1_9ASTE)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071900
ISO
PLAZA Integrative Orthologyregulation of protein serine/threonine kinase activity AT5G47080
GO:0042753
ISO
PLAZA Integrative Orthologypositive regulation of circadian rhythm AT2G44680
GO:0006468
ISO
PLAZA Integrative Orthologyprotein phosphorylation AT5G47080
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT3G60250
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT2G44680
GO:0045859
ISO
PLAZA Integrative Orthologyregulation of protein kinase activity AT3G60250
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT2G44680
GO:0080163
IBA
GOA Databaseregulation of protein serine/threonine phosphatase activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G44680
GO:0004674
ISO
PLAZA Integrative Orthologyprotein serine/threonine kinase activity AT2G44680
GO:0008134
ISO
PLAZA Integrative Orthologytranscription factor binding AT3G60250
GO:0019887
IBA
IEA
GOA Databaseprotein kinase regulator activity
GO:0019887
IEA
InterProprotein kinase regulator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G44680
GO:0005956
IBA
IEA
GOA Databaseprotein kinase CK2 complex
GO:0005956
IEA
InterProprotein kinase CK2 complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G44680
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000704 Casein kinase II, regulatory subunit
IPR035991 Casein kinase II subunit beta-like
IPR016149 Casein kinase II, regulatory subunit, N-terminal
Mapman id Description
18.4.3.9.2 Protein modification.phosphorylation.CMGC protein kinase superfamily.CK-II protein kinase heterodimer.regulatory subunit beta