Gene: AT5G47080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G47080
  • Transcript Identifier AT5G47080.4
  • Gene Type Coding gene
  • Location Chr5 : 19124969-19126397 : negative

Gene Family Information

  • ID HOM05D001479
  • #Genes/#Species 429/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G47080.4
  • symbol CKB1
  • full_name casein kinase II beta chain 1
  • uniprot P40228

Descriptions

  • Description casein kinase II beta chain 1
  • Computational description casein kinase II beta chain 1 (CKB1); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 2 (TAIR:AT4G17640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Computational description casein kinase II beta chain 1 (CKB1); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 2 (TAIR:AT4G17640.2).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080163
IBA
Gene Ontologyregulation of protein serine/threonine phosphatase activity1
GO:0006468
IDA
Gene Ontologyprotein phosphorylation2
GO:0071900
IDA
Gene Ontologyregulation of protein serine/threonine kinase activity3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0019887
IDA, IGI
IBA
IEA
Gene Ontologyprotein kinase regulator activity1 2 5
GO:0019887
IEA
InterProprotein kinase regulator activity
GO:0004674
IDA
Gene Ontologyprotein serine/threonine kinase activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005956
IEA
GOA Databaseprotein kinase CK2 complex
GO:0005956
IDA
IBA
Gene Ontologyprotein kinase CK2 complex1 2
GO:0005956
IEA
InterProprotein kinase CK2 complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus6
GO:0005829
IEA
GOA Databasecytosol
GO:0005829
IDA
Gene Ontologycytosol6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000704 Casein kinase II, regulatory subunit
IPR016149 Casein kinase II, regulatory subunit, N-terminal
IPR035991 Casein kinase II subunit beta-like
Mapman id Description
18.4.3.9.2 Protein modification.phosphorylation.CMGC protein kinase superfamily.CK-II protein kinase heterodimer.regulatory subunit beta