Gene: Solyc01g086890.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g086890.3
  • Transcript Identifier Solyc01g086890.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 74059172-74063477 : negative

Gene Family Information

  • ID HOM05D004785
  • #Genes/#Species 154/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g086890.3.1
  • uniprot A0A3Q7EJ36
  • gene_id Solyc01g086890

Descriptions

  • Description G-patch domain-containing protein/Surp domain-containing protein (AHRD V3.3 *** A0A1Q3BXL6_CEPFO)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G52120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000061 SWAP/Surp
IPR035967 SWAP/Surp superfamily
IPR000467 G-patch domain
IPR040169 SURP and G-patch domain-containing protein 1/2
Mapman id Description
35.1 not assigned.annotated