Gene: Solyc01g080530.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g080530.3
- Transcript Identifier Solyc01g080530.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 72346354-72354477 : positive
Gene Family Information
- ID HOM05D000373
- #Genes/#Species 1301/100
- Phylogenetic origin
- ID ORTHO05D001146
- #Genes/#Species 475/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc01g080530.3.1
- uniprot A0A3Q7F1K2
- gene_id Solyc01g080530
Descriptions
- Description 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1Q140_ARTAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0018401 | IBA | GOA Database | peptidyl-proline hydroxylation to 4-hydroxy-L-proline |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004656 | IBA IEA | GOA Database | procollagen-proline 4-dioxygenase activity | |
| GO:0005506 | IEA | GOA Database | iron ion binding | |
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0031418 | IEA | GOA Database | L-ascorbic acid binding | |
| GO:0031418 | IEA | InterPro | L-ascorbic acid binding | |
| GO:0016705 | IEA | GOA Database | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| GO:0016705 | IEA | InterPro | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0051213 | IEA | GOA Database | dioxygenase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | IBA IEA | GOA Database | endoplasmic reticulum | |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G18900 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G18900 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G18900 |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 18.9.1 | Protein modification.hydroxylation.prolyl hydroxylase |