Gene: Solyc01g066840.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g066840.3
- Transcript Identifier Solyc01g066840.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 67825351-67826391 : positive
Gene Family Information
- ID HOM05D001496
- #Genes/#Species 423/96
- Phylogenetic origin
- ID ORTHO05D002503
- #Genes/#Species 284/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc01g066840.3.1
- uniprot A0A3Q7EFJ5
- gene_id Solyc01g066840
Descriptions
- Description 40S ribosomal protein S21 (AHRD V3.3 *** A0A1U8E7W4_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation | |
| GO:0000447 | IBA | GOA Database | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0000461 | IBA | GOA Database | endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT3G53890 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0022627 | IBA | GOA Database | cytosolic small ribosomal subunit | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G53890 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT3G53890 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G53890 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT3G53890 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.3.1.23 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS21 |