Gene: Solyc01g057270.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g057270.4
- Transcript Identifier Solyc01g057270.4.1
- Gene Type Coding gene
- Location SL4.0ch01 : 53534018-53544434 : positive
Gene Family Information
- ID HOM05D000660
- #Genes/#Species 863/99
- Phylogenetic origin
- ID ORTHO05D000766
- #Genes/#Species 623/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc01g057270.4.1
- uniprot A0A3Q7EEK7
- gene_id Solyc01g057270
Descriptions
- Description Calmodulin-binding transcription factor SR4 (AHRD V3.3 *** H8ZRY5_SOLLC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003712 | IBA | GOA Database | transcription coregulator activity | |
| GO:0003690 | IBA | GOA Database | double-stranded DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR020683 | Ankyrin repeat-containing domain |
| IPR013783 | Immunoglobulin-like fold |
| IPR005559 | CG-1 DNA-binding domain |
| IPR002110 | Ankyrin repeat |
| IPR014756 | Immunoglobulin E-set |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR000048 | IQ motif, EF-hand binding site |
| Mapman id | Description |
|---|---|
| 15.5.26 | RNA biosynthesis.transcriptional regulation.transcription factor (CAMTA) |