Gene: Solyc01g056850.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g056850.3
  • Transcript Identifier Solyc01g056850.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 50242032-50247998 : negative

Gene Family Information

  • ID HOM05D000936
  • #Genes/#Species 645/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g056850.3.1
  • uniprot A0A3Q7EDE2
  • gene_id Solyc01g056850

Descriptions

  • Description CTP synthase (AHRD V3.3 *** A0A2G2XFG8_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006241
IBA
IEA
GOA DatabaseCTP biosynthetic process
GO:0006241
IEA
InterProCTP biosynthetic process
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT3G12670
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G12670
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G12670
GO:0019856
IBA
GOA Databasepyrimidine nucleobase biosynthetic process
GO:0006221
IEA
GOA Databasepyrimidine nucleotide biosynthetic process
GO:0006221
IEA
InterPropyrimidine nucleotide biosynthetic process
GO:0006541
IEA
GOA Databaseglutamine metabolic process
GO:0044210
IEA
GOA Database'de novo' CTP biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003883
IBA
IEA
GOA DatabaseCTP synthase activity
GO:0003883
IEA
InterProCTP synthase activity
GO:0042802
IBA
GOA Databaseidentical protein binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G12670
GO:0097268
ISO
PLAZA Integrative Orthologycytoophidium AT2G34890

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004468 CTP synthase
IPR017456 CTP synthase, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR029062 Class I glutamine amidotransferase-like
IPR033828 CTP synthase GATase domain
IPR017926 Glutamine amidotransferase
Mapman id Description
6.2.1.6 Nucleotide metabolism.pyrimidines.de novo biosynthesis.CTP synthetase