Gene: Solyc01g007240.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g007240.3
- Transcript Identifier Solyc01g007240.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 1813868-1814479 : positive
Gene Family Information
- ID HOM05D000980
- #Genes/#Species 614/90
- Phylogenetic origin
- ID ORTHO05D000649
- #Genes/#Species 711/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc01g007240.3.1
- uniprot A0A3Q7E8M7
- gene_id Solyc01g007240
Descriptions
- Description Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** O82294_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT3G11650 |
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT5G06320 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT5G06320 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT5G06320 |
| GO:0098542 | IEA | GOA Database | defense response to other organism | |
| GO:0098542 | IEA | InterPro | defense response to other organism | |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT5G06320 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT2G35980 |
| GO:0051707 | ISO | PLAZA Integrative Orthology | response to other organism | AT2G35980 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G06320 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G06320 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G06320 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G11650 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G06320 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT5G06320 |
| GO:0046658 | IBA | GOA Database | anchored component of plasma membrane | |
| GO:0009506 | IBA | GOA Database | plasmodesma | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044839 | Protein NDR1-like |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |