Gene: Solyc01g006160.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g006160.3
  • Transcript Identifier Solyc01g006160.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 815808-817152 : negative

Gene Family Information

  • ID HOM05D001784
  • #Genes/#Species 366/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g006160.3.1
  • uniprot A0A3Q7E7T6
  • gene_id Solyc01g006160

Descriptions

  • Description 60S acidic ribosomal protein P1 (AHRD V3.3 *** A0A2G2W8Q0_CAPBA),Pfam:PF00428
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032147
IEA
GOA Databaseactivation of protein kinase activity
GO:0002181
IBA
GOA Databasecytoplasmic translation
GO:0006414
IEA
GOA Databasetranslational elongation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044877
ISO
PLAZA Integrative Orthologyprotein-containing complex binding Zm00001eb260880
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G47700
GO:0030295
IBA
GOA Databaseprotein kinase activator activity
GO:0043021
IBA
GOA Databaseribonucleoprotein complex binding
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G01100
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT1G01100
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT1G01100
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G01100
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G01100
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G01100
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G01100
GO:0022625
IBA
GOA Databasecytosolic large ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038716 Ribosomal protein P1/P2, N-terminal domain
Mapman id Description
17.1.2.1.46 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPP1