Gene: Solyc01g006140.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g006140.4
  • Transcript Identifier Solyc01g006140.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 799322-803415 : negative

Gene Family Information

  • ID HOM05D002084
  • #Genes/#Species 319/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g006140.4.1
  • uniprot A0A3Q7E8R9
  • gene_id Solyc01g006140

Descriptions

  • Description CDT1-like protein a, chloroplastic (AHRD V3.3 *** A0A2I4F6Q2_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007049
IEA
GOA Databasecell cycle
GO:0030174
IBA
GOA Databaseregulation of DNA-dependent DNA replication initiation
GO:0000278
IBA
GOA Databasemitotic cell cycle
GO:0000076
IBA
GOA DatabaseDNA replication checkpoint signaling
GO:0071163
IBA
GOA DatabaseDNA replication preinitiation complex assembly
GO:0051276
ISO
PLAZA Integrative Orthologychromosome organization AT2G31270
GO:0006260
ISO
PLAZA Integrative OrthologyDNA replication AT2G31270
GO:0048229
ISO
PLAZA Integrative Orthologygametophyte development AT2G31270
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G31270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IBA
GOA DatabaseDNA binding
GO:0070182
IBA
GOA DatabaseDNA polymerase binding
GO:0019901
ISO
PLAZA Integrative Orthologyprotein kinase binding AT2G31270
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G31270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G31270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032054 DNA replication factor Cdt1, C-terminal
IPR038090 DNA replication factor Cdt1, C-terminal WH domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR014939 CDT1 Geminin-binding domain-like
Mapman id Description
13.2.1.3 Cell cycle organisation.DNA replication.preinitiation.helicase auxiliary factor (CDT1)