Gene: Sed0019080

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0019080
  • Transcript Identifier Sed0019080.1
  • Gene Type Coding gene
  • Location LG10 : 35465883-35479182 : positive

Gene Family Information

  • ID HOM05D000660
  • #Genes/#Species 863/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0019080.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G09410
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G09410
GO:0071275
ISO
PLAZA Integrative Orthologycellular response to aluminum ion AT5G64220
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G09410
GO:0050826
ISO
PLAZA Integrative Orthologyresponse to freezing AT5G09410
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G09410
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G09410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
IEA
InterProprotein binding
GO:0005516
ISO
PLAZA Integrative Orthologycalmodulin binding AT5G09410
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G64220
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G64220

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G09410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014756 Immunoglobulin E-set
IPR005559 CG-1 DNA-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR002909 IPT domain
IPR000048 IQ motif, EF-hand binding site
IPR036770 Ankyrin repeat-containing domain superfamily
IPR013783 Immunoglobulin-like fold
Mapman id Description
15.5.26 RNA biosynthesis.transcriptional regulation.transcription factor (CAMTA)