Gene: Sed0017468

General Information

Structural Information

Species Sechium edule
Gene Identifier Sed0017468
Transcript Identifier Sed0017468.1
Gene Type Coding gene
Location LG08 : 1710521-1713753 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000600
#Genes/#Species 940/96
Phylogenetic origin

ID ORTHO05D000432
#Genes/#Species 939/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid Sed0017468.1

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010215	IEA	InterPro	cellulose microfibril organization
GO:0052324	ISO	PLAZA Integrative Orthology	plant-type cell wall cellulose biosynthetic process	AT3G29810
GO:0048354	ISO	PLAZA Integrative Orthology	mucilage biosynthetic process involved in seed coat development	AT3G29810
GO:0048316	ISO	PLAZA Integrative Orthology	seed development	AT3G29810
GO:0010214	ISO	PLAZA Integrative Orthology	seed coat development	AT3G29810
GO:0009664	ISO	PLAZA Integrative Orthology	plant-type cell wall organization	AT3G29810
GO:0009834	ISO	PLAZA Integrative Orthology	plant-type secondary cell wall biogenesis	AT5G15630
GO:0009832	ISO	PLAZA Integrative Orthology	plant-type cell wall biogenesis	AT3G29810

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0031225	IEA	InterPro	anchored component of membrane
GO:0005794	ISO	PLAZA Integrative Orthology	Golgi apparatus	AT3G29810
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT5G15630
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT5G15630

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006918	COBRA, plant

Mapman id	Description
21.1.2.2	Cell wall organisation.cellulose.cellulose-hemicellulose network assembly.regulatory protein (COB)