Gene: Sed0011885
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0011885
- Transcript Identifier Sed0011885.1
- Gene Type Coding gene
- Location LG08 : 20049270-20052719 : positive
Gene Family Information
- ID HOM05D004227
- #Genes/#Species 168/97
- Phylogenetic origin
- ID ORTHO05D005027
- #Genes/#Species 165/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sed0011885.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008380 | IEA | InterPro | RNA splicing | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G02140 |
| GO:0010183 | ISO | PLAZA Integrative Orthology | pollen tube guidance | AT1G02140 |
| GO:0010628 | ISO | PLAZA Integrative Orthology | positive regulation of gene expression | AT1G02140 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G02140 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0035145 | IEA | InterPro | exon-exon junction complex | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0016607 | ISO | PLAZA Integrative Orthology | nuclear speck | AT1G02140 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G02140 |
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT1G02140 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.3.1.1.2 | Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).core components.component Magoh |