Gene: Sed0006853
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0006853
- Transcript Identifier Sed0006853.1
- Gene Type Coding gene
- Location LG01 : 6879504-6893134 : positive
Gene Family Information
- ID HOM05D000031
- #Genes/#Species 5385/95
- Phylogenetic origin
- ID ORTHO05D000030
- #Genes/#Species 3569/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sed0006853.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007166 | ISO | PLAZA Integrative Orthology | cell surface receptor signaling pathway | AT1G21250 |
| GO:0010045 | ISO | PLAZA Integrative Orthology | response to nickel cation | AT1G16150 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT1G21250 |
| GO:0009826 | ISO | PLAZA Integrative Orthology | unidimensional cell growth | AT1G21210 |
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT1G79680 |
| GO:0048527 | ISO | PLAZA Integrative Orthology | lateral root development | AT1G21210 |
| GO:0009615 | ISO | PLAZA Integrative Orthology | response to virus | AT1G21250 |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT1G79680 |
| GO:0009311 | ISO | PLAZA Integrative Orthology | oligosaccharide metabolic process | AT1G21270 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT1G79680 |
| GO:0009620 | ISO | PLAZA Integrative Orthology | response to fungus | AT1G79680 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G16150 |
| GO:0046777 | ISO | PLAZA Integrative Orthology | protein autophosphorylation | AT1G16130 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G16090 |
| GO:0009992 | ISO | PLAZA Integrative Orthology | cellular water homeostasis | AT1G21270 |
| GO:0010043 | ISO | PLAZA Integrative Orthology | response to zinc ion | AT1G16150 |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G21250 |
| GO:0004674 | IEA | InterPro | protein serine/threonine kinase activity | |
| GO:0004383 | ISO | PLAZA Integrative Orthology | guanylate cyclase activity | AT1G79680 |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0030247 | IEA | InterPro | polysaccharide binding | |
| GO:0004672 | IEA | InterPro | protein kinase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009986 | ISO | PLAZA Integrative Orthology | cell surface | AT1G16150 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G16150 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G21250 |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT1G16150 |
| GO:0016021 | IEA | InterPro | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013695 | Wall-associated receptor kinase |
| IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
| IPR025287 | Wall-associated receptor kinase, galacturonan-binding domain |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR000742 | EGF-like domain |
| IPR001881 | EGF-like calcium-binding domain |
| IPR000719 | Protein kinase domain |
| Mapman id | Description |
|---|---|
| 18.4.1.25 | Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (WAK/WAKL) |