Gene: Sed0005689

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0005689
  • Transcript Identifier Sed0005689.3
  • Gene Type Coding gene
  • Location LG06 : 39206632-39208788 : negative

Gene Family Information

  • ID HOM05D001934
  • #Genes/#Species 342/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0005689.3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G66730
GO:0015074
ISO
PLAZA Integrative OrthologyDNA integration AT1G66730
GO:0006310
ISO
PLAZA Homology (enrichment)DNA recombination HOM05D001934
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT1G66730
GO:1904975
ISO
PLAZA Integrative Orthologyresponse to bleomycin AT1G66730
GO:0006303
ISO
PLAZA Integrative Orthologydouble-strand break repair via nonhomologous end joining AT1G66730
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT1G66730
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT1G66730
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G66730
GO:0002237
ISO
PLAZA Integrative Orthologyresponse to molecule of bacterial origin AT1G66730
GO:0071897
ISO
PLAZA Homology (enrichment)DNA biosynthetic process HOM05D001934
GO:0010225
ISO
PLAZA Integrative Orthologyresponse to UV-C AT1G66730
GO:2000685
ISO
PLAZA Integrative Orthologypositive regulation of cellular response to X-ray AT1G66730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D001934
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D001934
GO:0003910
ISO
PLAZA Homology (enrichment)DNA ligase (ATP) activity HOM05D001934

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR011084 DNA repair metallo-beta-lactamase
Mapman id Description
35.1 not assigned.annotated