Gene: Sed0003306
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0003306
- Transcript Identifier Sed0003306.1
- Gene Type Coding gene
- Location LG05 : 8711662-8712342 : positive
Gene Family Information
- ID HOM05D000124
- #Genes/#Species 2752/96
- Phylogenetic origin
- ID ORTHO05D000056
- #Genes/#Species 2677/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sed0003306.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009873 | IEA | InterPro | ethylene-activated signaling pathway | |
| GO:0010104 | ISO | PLAZA Integrative Orthology | regulation of ethylene-activated signaling pathway | Solyc08g078180.1 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT2G44840 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G44840 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G44840 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G44840 |
| GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT2G44840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.7.1 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF) |