Gene: Sed0000546

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0000546
  • Transcript Identifier Sed0000546.2
  • Gene Type Coding gene
  • Location LG02 : 49485435-49490234 : positive

Gene Family Information

  • ID HOM05D000887
  • #Genes/#Species 675/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0000546.2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019676
ISO
PLAZA Integrative Orthologyammonia assimilation cycle AT5G35630
GO:0042128
ISO
PLAZA Integrative Orthologynitrate assimilation AT5G16570
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT5G35630
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G17820
GO:0006542
IEA
InterProglutamine biosynthetic process
GO:0006807
IEA
InterPronitrogen compound metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G35630
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT3G17820
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G16570
GO:0004356
IEA
InterProglutamate-ammonia ligase activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT3G17820
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G17820
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G35630
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G35630
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G48470
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G48470
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G35630
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT5G35630
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G17820
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G35630
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G17820
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G35630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008146 Glutamine synthetase, catalytic domain
IPR008147 Glutamine synthetase, beta-Grasp domain
IPR036651 Glutamine synthetase, N-terminal domain superfamily
IPR014746 Glutamine synthetase/guanido kinase, catalytic domain
Mapman id Description
25.1.4.1.2 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase activities.plastidial glutamine synthetase (GLN2)