Gene: Sc17g0006780

General Information

Structural Information

Species Simmondsia chinensis
Gene Identifier Sc17g0006780
Transcript Identifier Sc17g0006780.01
Gene Type Coding gene
Location GWHAASQ00000017 : 30470243-30471037 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000307
#Genes/#Species 1483/93
Phylogenetic origin

ID ORTHO05D000166
#Genes/#Species 1551/94
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Sc17g0006780.01

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045944	IEA	InterPro	positive regulation of transcription by RNA polymerase II
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT1G65330

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0046983	IEA	InterPro	protein dimerization activity
GO:0000981	IEA	InterPro	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000987	IEA	InterPro	cis-regulatory region sequence-specific DNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G31630
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT5G26630

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT5G48670
GO:0043078	ISO	PLAZA Integrative Orthology	polar nucleus	AT5G48670
GO:0090406	ISO	PLAZA Integrative Orthology	pollen tube	AT1G65330

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR033897	MADS SRF-like

Mapman id	Description
15.5.14	RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)