Gene: Sc09g0005870
General Information
Structural Information
- Species Simmondsia chinensis
- Gene Identifier Sc09g0005870
- Transcript Identifier Sc09g0005870.01
- Gene Type Coding gene
- Location GWHAASQ00000009 : 10259320-10263859 : negative
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000063
- #Genes/#Species 2631/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sc09g0005870.01
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010267 | ISO | PLAZA Integrative Orthology | production of ta-siRNAs involved in RNA interference | AT3G10490 |
| GO:0016441 | ISO | PLAZA Integrative Orthology | posttranscriptional gene silencing | AT3G10490 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT3G10480 |
| GO:0034720 | ISO | PLAZA Integrative Orthology | histone H3-K4 demethylation | AT3G10480 |
| GO:2000377 | ISO | PLAZA Integrative Orthology | regulation of reactive oxygen species metabolic process | AT3G10500 |
| GO:0009819 | ISO | PLAZA Integrative Orthology | drought recovery | AT3G10500 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT3G10500 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT3G10480 |
| GO:0002237 | ISO | PLAZA Integrative Orthology | response to molecule of bacterial origin | AT3G10490 |
| GO:0048573 | ISO | PLAZA Integrative Orthology | photoperiodism, flowering | AT3G10480 |
| GO:0009962 | ISO | PLAZA Integrative Orthology | regulation of flavonoid biosynthetic process | AT5G04410 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT3G10490 |
| GO:0060966 | ISO | PLAZA Integrative Orthology | regulation of gene silencing by RNA | AT3G10480 |
| GO:0009644 | ISO | PLAZA Integrative Orthology | response to high light intensity | AT5G04410 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT3G10500 |
| GO:0006351 | ISO | PLAZA Integrative Orthology | transcription, DNA-templated | AT3G10480 |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G10480 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT3G10480 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT3G10480 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G10480 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G10480 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G10500 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G10500 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G10490 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |