Gene: AT3G10490

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G10490
  • Transcript Identifier AT3G10490.2
  • Gene Type Coding gene
  • Location Chr3 : 3268075-3270608 : positive

Gene Family Information

  • ID HOM05D000010
  • #Genes/#Species 9383/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G10490.2
  • symbol NAC052
  • Alias ANAC051,Arabidopsis NAC domain containing protein 51,ANAC052,NAC domain containing protein 52
  • uniprot Q9SQY0

Descriptions

  • Description NAC domain containing protein 52
  • Computational description Arabidopsis NAC domain containing protein 51 (ANAC051); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3001 Blast hits to 2994 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3001; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Computational description NAC domain containing protein 52 (NAC052); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3394 Blast hits to 3360 proteins in 132 species: Archae - 4; Bacteria - 13; Metazoa - 65; Fungi - 17; Plants - 3017; Viruses - 4; Other Eukaryotes - 274 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048573
IMP
Gene Ontologyphotoperiodism, flowering1
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009908
IEA
GOA Databaseflower development
GO:0006952
IEA
GOA Databasedefense response
GO:0016441
IMP
Gene Ontologyposttranscriptional gene silencing2
GO:0010267
IMP
Gene Ontologyproduction of ta-siRNAs involved in RNA interference2
GO:0060966
IMP
Gene Ontologyregulation of gene silencing by RNA3
GO:0045892
IDA, IMP
Gene Ontologynegative regulation of transcription, DNA-templated1 3
GO:0034720
IMP
Gene Ontologyhistone H3-K4 demethylation1
GO:0010228
IGI
Gene Ontologyvegetative to reproductive phase transition of meristem1
GO:0006351
IDA
Gene Ontologytranscription, DNA-templated4
GO:0009555
IMP
Gene Ontologypollen development5
GO:0002237
IEP
Gene Ontologyresponse to molecule of bacterial origin6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0000976
IDA
Gene Ontologytranscription cis-regulatory region binding1
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding4
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity4 7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus8
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3
GO:0005794
ISM
Gene OntologyGolgi apparatus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036093 NAC domain superfamily
IPR003441 NAC domain
Mapman id Description
15.5.17 RNA biosynthesis.transcriptional regulation.transcription factor (NAC)