Gene: SHI25227

General Information

Structural Information

  • Species Sapria himalayana
  • Gene Identifier SHI25227
  • Transcript Identifier SHI25227-RA
  • Gene Type Coding gene
  • Location scaffold48_4099315 : 302127-323339 : negative

Gene Family Information

  • ID HOM05D001342
  • #Genes/#Species 469/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SHI25227-RA

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT1G23310
GO:0019481
ISO
PLAZA Integrative OrthologyL-alanine catabolic process, by transamination AT1G17290
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G17290
GO:0009853
ISO
PLAZA Integrative Orthologyphotorespiration AT1G23310
GO:0009058
IEA
InterProbiosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0047958
ISO
PLAZA Integrative Orthologyglycine:2-oxoglutarate aminotransferase activity AT1G70580
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G70580
GO:0005524
ISO
PLAZA Integrative OrthologyATP binding AT1G17290
GO:0003824
IEA
InterProcatalytic activity
GO:0008453
ISO
PLAZA Integrative Orthologyalanine-glyoxylate transaminase activity AT1G70580
GO:0004021
ISO
PLAZA Integrative OrthologyL-alanine:2-oxoglutarate aminotransferase activity AT1G70580
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0008483
IEA
InterProtransaminase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G17290
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G23310
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G70580
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT1G70580
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G23310
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G70580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015424 Pyridoxal phosphate-dependent transferase
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR045088 Aminotransferase ALAT1/2-like
IPR004839 Aminotransferase, class I/classII
Mapman id Description
35.1 not assigned.annotated