Gene: SGA_v2.0_scaffold92G28182

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold92G28182
  • Transcript Identifier SGA_v2.0_scaffold92T28182
  • Gene Type Coding gene
  • Location scaffold92 : 360232-363373 : positive

Gene Family Information

  • ID HOM05D005961
  • #Genes/#Species 132/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Transducin/WD40 repeat-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006406
IEA
InterPromRNA export from nucleus
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT5G56130
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT5G56130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000347
ISO
PLAZA Integrative OrthologyTHO complex AT5G56130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR040132 TREX component Tex1/THOC3
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
Mapman id Description
16.10.1.1.3 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC3/Tex1