Gene: AT4G01037

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G01037
  • Transcript Identifier AT4G01037.1
  • Gene Type Coding gene
  • Location Chr4 : 451444-453030 : negative

Gene Family Information

  • ID HOM05D000257
  • #Genes/#Species 1674/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G01037.1
  • symbol WTF1
  • Alias AtWTF1
  • full_name what's this factor?
  • uniprot A0MFS5

Descriptions

  • Description Ubiquitin carboxyl-terminal hydrolase family protein
  • Computational description what's this factor? (WTF1); CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT5G62990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
IEA
GOA DatabaseGroup II intron splicing
GO:0000373
IMP
Gene OntologyGroup II intron splicing1
GO:0000373
IEA
InterProGroup II intron splicing
GO:0015979
IMP
Gene Ontologyphotosynthesis1
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IDA
Gene OntologyRNA binding1
GO:0003723
IEA
InterProRNA binding
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
Gene Ontologychloroplast1
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021099 Plant organelle RNA recognition domain
IPR045040 PORR family
IPR040293 Protein WHAT'S THIS FACTOR 1-like
Mapman id Description
16.11.4.1.1.4 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.basal splicing factor (WTF1)