Gene: SGA_v2.0_scaffold4G01997

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold4G01997
  • Transcript Identifier SGA_v2.0_scaffold4T01997
  • Gene Type Coding gene
  • Location scaffold4 : 868143-875056 : positive

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Polyubiquitin
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0006464
ISO
PLAZA Integrative Orthologycellular protein modification process AT4G05320
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT4G05320
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT4G05320
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G03240
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G20620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G20620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G09790
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G37640
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G37640
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G09790
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT3G09790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR001975 Ribosomal protein L40e
IPR011332 Zinc-binding ribosomal protein
IPR000626 Ubiquitin-like domain
IPR038587 Ribosomal protein L40e superfamily
IPR019956 Ubiquitin domain
Mapman id Description
17.1.2.1.43 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL40