Gene: SGA_v2.0_scaffold47G17516
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold47G17516
- Transcript Identifier SGA_v2.0_scaffold47T17516
- Gene Type Coding gene
- Location scaffold47 : 200233-203295 : positive
Gene Family Information
- ID HOM05D004929
- #Genes/#Species 150/95
- Phylogenetic origin
- ID ORTHO05D006492
- #Genes/#Species 142/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product GHMP kinase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008299 | IEA | InterPro | isoprenoid biosynthetic process | |
| GO:0006020 | ISO | PLAZA Integrative Orthology | inositol metabolic process | AT3G01640 |
| GO:0042546 | ISO | PLAZA Integrative Orthology | cell wall biogenesis | AT3G01640 |
| GO:0048868 | ISO | PLAZA Integrative Orthology | pollen tube development | AT3G01640 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004496 | IEA | InterPro | mevalonate kinase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004340 | ISO | PLAZA Integrative Orthology | glucokinase activity | AT3G01640 |
| GO:0008266 | ISO | PLAZA Integrative Orthology | poly(U) RNA binding | AT3G01640 |
| GO:0047940 | ISO | PLAZA Integrative Orthology | glucuronokinase activity | AT3G01640 |
| GO:0009702 | ISO | PLAZA Integrative Orthology | L-arabinokinase activity | AT3G01640 |
| GO:0004335 | ISO | PLAZA Integrative Orthology | galactokinase activity | AT3G01640 |
| GO:0047912 | ISO | PLAZA Integrative Orthology | galacturonokinase activity | AT3G01640 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G01640 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 3.13.3.2.2 | Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid biosynthesis.myo-inositol oxidation pathway (MIOP).D-glucuronic acid kinase |