Gene: SGA_v2.0_scaffold34G13944

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold34G13944
  • Transcript Identifier SGA_v2.0_scaffold34T13944
  • Gene Type Coding gene
  • Location scaffold34 : 2398410-2398982 : positive

Gene Family Information

  • ID HOM05D000297
  • #Genes/#Species 1509/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product nuclear factor Y, subunit B3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0048574
ISO
PLAZA Integrative Orthologylong-day photoperiodism, flowering AT5G47640
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering Os08g0174500
GO:0051512
ISO
PLAZA Integrative Orthologypositive regulation of unidimensional cell growth Os08g0174500
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc07g065500.2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0001228
IEA
InterProDNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G14540
GO:0003712
ISO
PLAZA Integrative Orthologytranscription coregulator activity AT5G47640
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G47640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016602
IEA
InterProCCAAT-binding factor complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os07g0606600
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os03g0413000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR027113 Transcription factor NFYB/HAP3
IPR003958 Transcription factor CBF/NF-Y/archaeal histone domain
Mapman id Description
15.5.49.2 RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YB