Gene: SGA_v2.0_scaffold334G49080

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold334G49080
  • Transcript Identifier SGA_v2.0_scaffold334T49080
  • Gene Type Coding gene
  • Location scaffold334 : 273439-277495 : positive

Gene Family Information

  • ID HOM05D004127
  • #Genes/#Species 171/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing protein, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010019
ISO
PLAZA Integrative Orthologychloroplast-nucleus signaling pathway AT2G31400
GO:0031930
ISO
PLAZA Integrative Orthologymitochondria-nucleus signaling pathway AT2G31400

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT2G31400

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G31400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR033443 Pentacotripeptide-repeat region of PRORP
Mapman id Description
35.1 not assigned.annotated