Gene: SGA_v2.0_scaffold29G12154

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold29G12154
  • Transcript Identifier SGA_v2.0_scaffold29T12154
  • Gene Type Coding gene
  • Location scaffold29 : 987320-990137 : positive

Gene Family Information

  • ID HOM05D000845
  • #Genes/#Species 706/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product RNA-binding (RRM/RBD/RNP motifs) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009738
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway AT3G56860
GO:0008219
ISO
PLAZA Integrative Orthologycell death AT3G56860
GO:0009693
ISO
PLAZA Integrative Orthologyethylene biosynthetic process AT3G56860
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT3G56860
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT3G56860
GO:0051028
ISO
PLAZA Integrative OrthologymRNA transport Os01g0265800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G56860
GO:0035925
ISO
PLAZA Integrative OrthologymRNA 3'-UTR AU-rich region binding AT3G56860
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G56860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G56860
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os01g0265800
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G56860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated