Gene: SGA_v2.0_scaffold23G10067

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold23G10067
Transcript Identifier SGA_v2.0_scaffold23T10067
Gene Type Coding gene
Location scaffold23 : 851594-855719 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000544
#Genes/#Species 1005/99
Phylogenetic origin

ID ORTHO05D000479
#Genes/#Species 874/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product PHD finger family protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0009651	ISO	PLAZA Integrative Orthology	response to salt stress	AT5G20510
GO:0009414	ISO	PLAZA Integrative Orthology	response to water deprivation	AT5G20510

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042393	IEA	InterPro	histone binding
GO:0003677	ISO	PLAZA Integrative Orthology	DNA binding	AT5G20510
GO:0003714	ISO	PLAZA Integrative Orthology	transcription corepressor activity	AT5G20510
GO:0035064	ISO	PLAZA Integrative Orthology	methylated histone binding	AT5G26210
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT5G26210

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT5G26210
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G26210

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001965	Zinc finger, PHD-type
IPR045104	Alfin
IPR011011	Zinc finger, FYVE/PHD-type
IPR019787	Zinc finger, PHD-finger
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR044104	Alfin1-like, PHD finger
IPR021998	Alfin, N-terminal

Mapman id	Description
12.3.6.2.2	Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (Alfin)