Gene: AT5G26210

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G26210
  • Transcript Identifier AT5G26210.1
  • Gene Type Coding gene
  • Location Chr5 : 9158566-9160221 : negative

Gene Family Information

  • ID HOM05D000544
  • #Genes/#Species 1005/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G26210.1
  • symbol AL4
  • uniprot O81488

Descriptions

  • Description alfin-like 4
  • Computational description alfin-like 4 (AL4); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006325
IEA
GOA Databasechromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035064
IDA
Gene Ontologymethylated histone binding1
GO:0000976
IPI
IBA
Gene Ontologytranscription cis-regulatory region binding2 3
GO:0003712
IBA
Gene Ontologytranscription coregulator activity2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0042393
IEA
GOA Databasehistone binding
GO:0042393
IEA
InterProhistone binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 2
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021998 Alfin, N-terminal
IPR045104 Alfin
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR044104 Alfin1-like, PHD finger
IPR001965 Zinc finger, PHD-type
IPR019787 Zinc finger, PHD-finger
Mapman id Description
12.3.6.2.2 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (Alfin)