Gene: SGA_v2.0_scaffold171G38878

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold171G38878
  • Transcript Identifier SGA_v2.0_scaffold171T38878
  • Gene Type Coding gene
  • Location scaffold171 : 219453-225741 : negative

Gene Family Information

  • ID HOM05D001707
  • #Genes/#Species 379/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product DEK domain-containing chromatin associated protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
InterProchromatin organization
GO:0006338
ISO
PLAZA Integrative Orthologychromatin remodeling AT4G26630
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G26630
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G26630
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G26630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G26630
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT4G26630
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT4G26630

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G26630
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G55660
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G26630
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G26630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014876 DEK, C-terminal
IPR044198 Protein DEK
Mapman id Description
12.1.4.1 Chromatin organisation.chromatin structure.structure modulation.regulatory factor (DEK)