Gene: SGA_v2.0_scaffold159G37563

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold159G37563
  • Transcript Identifier SGA_v2.0_scaffold159T37563
  • Gene Type Coding gene
  • Location scaffold159 : 156415-166990 : positive

Gene Family Information

  • ID HOM05D002380
  • #Genes/#Species 285/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035067
ISO
PLAZA Integrative Orthologynegative regulation of histone acetylation AT4G22140
GO:0009791
ISO
PLAZA Integrative Orthologypost-embryonic development AT4G22140
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G22140
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering AT4G22140
GO:0006325
ISO
PLAZA Integrative Orthologychromatin organization AT4G22140
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G22140
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT4G22140
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT4G22140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IEA
InterProchromatin binding
GO:0035064
ISO
PLAZA Integrative Orthologymethylated histone binding AT4G22140
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G22140
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G22140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G22140
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G32640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR011011 Zinc finger, FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger
IPR001965 Zinc finger, PHD-type
IPR001025 Bromo adjacent homology (BAH) domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR043151 Bromo adjacent homology (BAH) domain superfamily
Mapman id Description
12.3.6.2.1 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (SHL/EBS)